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R
Assembly genomes with Bowtie2
How to assembly multiple fastq files with Bowtie2 and how to count reads with Rsubread
k-means algorithm
How to implement k-means and K-medoids algorithm.
Differential gene expression with DESeq2
How to perform a differential gene expression analyis with DESeq2
Animated graphics with ggplot2 and gganimate
How to make animated an interactive plots with R
Retrieve information from Uniprot with Uniprot.ws
How to download information from Uniprot database
Differential gene expression with edgeR
How to perform a differential gene expression analyis with edgeR
Pairwise alignments.
How to make pairwise alingments with Biostrings package.
Principal Component Analysis
How to create a PCA easily with R
Accessing and downloading from entrez database system
How to get data from entrez with rentrez package.
Graphics with R ggplot2
Some basic examples about how to make plots with ggplot
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